How to Use the Molecular Modeling Facility Cluster
If you want to get an account on the cluster, please contact the Director at 4-4508 or e-mail to
nathan.crawford@uci.edu .
From a workstation X11 terminal, you can open a secure shell connection: General Admonitions
Login Nodes (gplogin1.ps.uci.edu and gplogin2)Non-compute-intensive programs can be run on the login nodes. These include result-visualization and molecule-building programs like:
Compute NodesThe following packages are set up to run from the queue on the compute nodes:
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Torque/Maui Queuing System
Full documentation
can be found on the Adaptive Computing website.
but here is a short list:
Once your job is ready to go, type "qsub run_pbsjob" and patiently wait for your results to come back.
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